Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707731Radial spoke head component 4A. (480 aa)    
Predicted Functional Partners:
rsph9
Radial spoke head 9 homolog.
  
 
 0.995
rsph3
Radial spoke head 3.
  
 
 0.989
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 
 0.974
ccdc40
Coiled-coil domain containing 40.
   
 
 0.943
dnai2
Dynein, axonemal, intermediate chain 2b.
   
 
 0.941
ccdc39
Uncharacterized protein.
   
 
 0.937
Nme5
Nucleoside diphosphate kinase homolog 5 isoform X2.
   
 
 0.934
tekt2
Tektin 2 (testicular).
   
 
 0.929
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.927
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.924
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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