Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100690566Prohibitin. (313 aa)    
Predicted Functional Partners:
phb
Prohibitin.
   
 0.997
c1qbp
Complement component 1, q subcomponent binding protein.
   
 0.964
gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.926
arfgef3
ARFGEF family member 3.
    
 
 0.918
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.917
LOC100701181
Microtubule-associated protein 1 light chain 3 gamma, like.
   
 0.917
LOC100697001
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.917
stoml2
Stomatin (EPB72)-like 2.
   
 0.905
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
  
 0.890
LOC100705312
Ubiquinol-cytochrome c reductase core protein 1.
  
 0.890
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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