STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100708294Non-specific serine/threonine protein kinase. (657 aa)    
Predicted Functional Partners:
nck1
Cytoplasmic protein.
    
 0.964
nck2
Cytoplasmic protein.
    
 0.964
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
    
 0.961
cdc42
Cell division cycle 42.
   
 0.944
ENSONIP00000000682
Intersectin 2a.
    
 0.943
I3KKD0_ORENI
Intersectin 2b.
    
 0.943
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
0.913
LOC100705444
Uncharacterized protein.
   
 0.852
LOC100705703
Uncharacterized protein.
   
 0.852
RAC2
Rac family small GTPase 2.
   
 0.852
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.