STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705731Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
LOC100703845
Si:rp71-17i16.4.
   
 0.852
I3JXF4_ORENI
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
 
 
 0.840
LOC100705823
Troponin I2, fast skeletal type.
   
 0.840
I3K303_ORENI
Troponin I type 1a (skeletal, slow).
 
 
 0.835
I3KBM6_ORENI
Troponin I type 1b (skeletal, slow).
 
 
 0.835
LOC100696264
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.816
LOC100704512
Troponin I4b, tandem duplicate 1.
   
 0.804
I3KCT8_ORENI
Troponin I, skeletal, slow c.
 
 
 0.798
TNNC1
Troponin C type 1a (slow).
   
 0.780
ENSONIP00000056394
Troponin I, slow skeletal muscle.
  
 0.765
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.