Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mfsd13aMajor facilitator superfamily domain containing 13A. (509 aa)    
Predicted Functional Partners:
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.693
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.681
svopl
SVOP-like.
      
 0.676
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.675
unc93a
Unc-93 homolog A.
      
 0.649
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.635
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.631
as3mt
Arsenite methyltransferase.
      
 0.629
LOC100712236
Spinster homolog 3 (Drosophila).
      
 0.623
mfsd3
Major facilitator superfamily domain containing 3.
      
 0.621
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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