Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lsm12LSM12 homolog b. (196 aa)    
Predicted Functional Partners:
I3KAX8_ORENI
Ataxin 2.
    
 0.988
LOC100705812
LsmAD domain-containing protein.
    
 0.976
Atxn2l
Ataxin 2-like.
    
 0.976
nufip2
Nuclear FMR1 interacting protein 2.
   
 
 0.959
LOC100699489
Uncharacterized protein.
    
   0.884
mcrip2
Si:dkey-44g23.5.
    
   0.884
pum1
Pumilio RNA-binding family member 1.
    
   0.860
LOC100698984
DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.
   
 
 0.836
LOC100707815
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.836
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.836
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.