STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691593Hairy-related 8.2. (190 aa)    
Predicted Functional Partners:
fancl
FA complementation group L.
    
 
 0.585
fancf
FA complementation group F.
    
 
 0.579
fancg
FA complementation group G.
   
 
 0.575
fancc
FA complementation group C.
    
   0.561
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
   0.506
fance
FA complementation group E.
    
   0.506
LOC100707106
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.486
LOC106098755
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.486
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.486
LOC100709852
TLE family member 2, transcriptional corepressor a.
    
 0.463
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.