STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691593Hairy-related 8.2. (190 aa)    
Predicted Functional Partners:
fancf
FA complementation group F.
    
  0.830
fancg
FA complementation group G.
    
  0.830
fancc
FA complementation group C.
    
  0.830
fancl
FA complementation group L.
    
  0.830
LOC100705644
Hes family bHLH transcription factor 6.
    
 0.701
LOC100692400
Hairy-related 13.
    
 0.701
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.670
fance
FA complementation group E.
    
  0.670
LOC100707106
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.629
LOC106098755
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.629
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.