Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709898Uncharacterized protein. (904 aa)    
Predicted Functional Partners:
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.922
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 0.895
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.891
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.890
LOC100698471
SET domain and mariner transposase fusion gene.
   
 0.877
I3IU26_ORENI
Lysine (K)-specific methyltransferase 2E.
    
 0.852
LOC100699058
Fe2OG dioxygenase domain-containing protein.
     
 0.806
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
     
 0.806
LOC100697420
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
     
 0.806
smyd3
SET and MYND domain containing 3.
   
 0.803
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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