STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMP22Peripheral myelin protein 22b. (154 aa)    
Predicted Functional Partners:
rnmt
mRNA cap guanine-N7 methyltransferase.
      
 0.686
LOC100709000
Myelin protein zero-like 1 like.
      
 0.653
gas2
Growth arrest-specific 2a.
      
 0.623
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
      
 0.575
pllp
Plasmolipin.
      
 0.540
LOC100709641
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.523
LOC102079731
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.523
LOC100690574
Transmembrane p24 trafficking protein 1b.
      
 0.489
LOC100710222
Transmembrane p24 trafficking protein 1a.
      
 0.489
Mbp
Myelin basic protein b.
      
 0.455
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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