STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JMG9_ORENIZinc and ring finger 2b. (196 aa)    
Predicted Functional Partners:
gpatch3
G patch domain containing 3.
      
 0.652
rspry1
Ring finger and SPRY domain containing 1.
      
 0.641
I3KPE6_ORENI
Sorting nexin 20.
      
 0.629
I3J1N4_ORENI
EF-hand calcium binding domain 1.
      
 0.629
eaf1
ELL associated factor 1.
      
 0.629
LOC100696677
Uncharacterized protein.
      
 0.618
Neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.618
LOC100693641
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.618
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.523
plekha8
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8.
      
 0.522
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.