STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JMG9_ORENIZinc and ring finger 2b. (196 aa)    
Predicted Functional Partners:
LOC100696677
Uncharacterized protein.
      
 0.702
Neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.702
LOC100693641
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.702
gpatch3
G patch domain containing 3.
      
 0.468
rspry1
Ring finger and SPRY domain containing 1.
      
 0.449
I3J1N4_ORENI
EF-hand calcium binding domain 1.
      
 0.443
Ttll10
Uncharacterized protein.
      
 0.442
I3KPE6_ORENI
Sorting nexin 20.
      
 0.430
eaf1
ELL associated factor 1.
      
 0.430
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.