STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Birc6Baculoviral IAP repeat containing 6. (4824 aa)    
Predicted Functional Partners:
LOC102081483
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.992
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.990
LOC100692890
RAN binding protein 2.
   
 0.974
rps27a
Ribosomal protein S27a.
   
 0.972
Tep1
Telomerase protein component 1 isoform X1.
   
 0.966
uba5
Ubiquitin-like modifier activating enzyme 5.
  
 0.962
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
  
 0.962
traf7
TNF receptor-associated factor 7.
    
 0.949
ENSONIP00000038349
RING finger protein 223.
   
 0.933
I3K2A8_ORENI
Lysine (K)-specific demethylase 6A, like.
   
 0.925
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.