STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697449Zgc:112285; Belongs to the peptidase S1 family. (321 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
  
 0.785
LOC100708633
Carboxypeptidase A1 (pancreatic).
   
 
 0.745
lasp1
LIM and SH3 protein 1.
      
 0.721
I3KRC2_ORENI
Uncharacterized protein.
     
 0.708
RRM2
Ribonucleotide reductase regulatory subunit M2.
     
 0.708
LOC100710041
Ribonucleotide reductase M2 b.
     
 0.589
ctsk
Cathepsin K.
     
 0.480
LOC100710506
Uncharacterized protein.
      
 0.426
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.412
CEL
Bile salt-stimulated lipase.
   
 0.411
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.