STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JMK5_ORENISynaptotagmin XV. (347 aa)    
Predicted Functional Partners:
ENSONIP00000077201
Synaptotagmin-12.
      
 0.730
prepl
Prolyl endopeptidase like.
      
 0.640
rapsn
Receptor-associated protein of the synapse, 43kD.
   
  
 0.633
gmppb
GDP-mannose pyrophosphorylase B.
    
 
 0.620
Dpagt1
Uncharacterized protein.
      
 0.617
ENSONIP00000000682
Intersectin 2a.
     
 0.557
I3KKD0_ORENI
Intersectin 2b.
     
 0.557
colq
Collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase.
      
 0.491
LOC100704887
Uncharacterized protein.
      
 0.491
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.474
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.