Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698755Filamin A interacting protein 1a. (1210 aa)    
Predicted Functional Partners:
LOC100711605
Malate synthase-like.
   
 
 0.732
Ahdc1
LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1.
      
 0.620
CLDN20-2
Claudin-20.
      
 0.559
I3J608_ORENI
NBR1 autophagy cargo receptor b.
   
 0.523
nbr1
NBR1 autophagy cargo receptor a.
   
 0.523
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
   
  0.486
wdr90
WD repeat domain 90.
   
 0.455
LOC100701317
MOB family member 4, phocein.
    
   0.434
LOC100697497
Programmed cell death 10a.
    
   0.430
LOC100709687
Programmed cell death 10b.
    
   0.430
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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