STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sarm1Sterile alpha and TIR motif containing 1. (725 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.784
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 
 0.775
tirap
Toll-interleukin 1 receptor (TIR) domain containing adaptor protein.
    
 
 0.749
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 
 0.687
rbp7
Nicotinamide-nucleotide adenylyltransferase.
    
 
 0.607
ube4b
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
      
 0.584
LOC100701005
Transmembrane p24 trafficking protein 7.
    
 0.572
LOC100701239
TRIF-NTD domain-containing protein.
    
 0.572
traf4
TNF receptor-associated factor.
   
 0.557
LOC100702954
Interferon regulatory factor 3.
      
 0.485
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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