Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100694113Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family. (209 aa)    
Predicted Functional Partners:
ENSONIP00000000682
Intersectin 2a.
   
 0.608
I3KKD0_ORENI
Intersectin 2b.
   
 0.608
ENSONIP00000038349
RING finger protein 223.
    
 0.600
I3KJ27_ORENI
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
 0.546
LOC100706288
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.543
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.532
Nos1ap
PID domain-containing protein.
    
 0.501
LOC100704536
Si:dkey-34e4.1.
    
 0.501
LOC100708108
Nitric oxide synthase 1 (neuronal) adaptor protein b.
    
 0.501
tsc2
Rap-GAP domain-containing protein.
    
 0.498
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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