STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100694384Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family. (203 aa)    
Predicted Functional Partners:
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.883
LOC100709337
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.727
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
   
  
 0.625
bfsp2
Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family.
   
  
 0.583
I3KXW1_ORENI
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
   
 0.530
hspb7
Heat shock protein beta-7.
   
 
 0.524
LOC100703162
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
  
0.492
cryba2
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
  
  
0.489
LOC100703259
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
  
 0.487
LOC100706288
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
  
 0.487
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.