Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100702806L-threonine dehydrogenase 2. (378 aa)    
Predicted Functional Partners:
gcat
Glycine C-acetyltransferase.
  
 
 0.934
LOC100693061
Threonine aldolase 1.
    
 0.919
I3JKS7_ORENI
PALP domain-containing protein.
   
 
 0.908
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 0.900
I3K213_ORENI
Epimerase domain-containing protein.
     
  0.866
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.835
SDS
Serine dehydratase.
   
 
 0.818
LOC100705758
Serine dehydratase-like.
   
 
 0.818
LOC100705145
Si:ch73-263o4.3.
   
 
 0.746
ivd
Isovaleryl-CoA dehydrogenase.
   
 
 0.731
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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