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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702806L-threonine dehydrogenase 2. (378 aa)    
Predicted Functional Partners:
gcat
Glycine C-acetyltransferase.
  
 
 0.959
LOC100693061
Threonine aldolase 1.
    
 0.929
I3JKS7_ORENI
PALP domain-containing protein.
   
 
 0.921
SDS
Serine dehydratase.
   
 
 0.914
LOC100705758
Serine dehydratase-like.
   
 
 0.914
LOC100693291
L-threonine dehydrogenase.
  
  
 
0.901
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.861
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.776
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.769
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 0.765
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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