Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692025Leucine rich repeat containing 34. (418 aa)    
Predicted Functional Partners:
rsph14
Uncharacterized protein.
    
 
 0.934
cfap161
Cilia- and flagella-associated protein 161.
   
 
 0.934
rsph3
Radial spoke head 3.
   
 
 0.882
LOC100707731
Radial spoke head component 4A.
   
 
 0.848
ccdc39
Uncharacterized protein.
   
 0.810
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.808
CFAP61
Cilia and flagella associated protein 61.
   
 
 0.807
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 0.805
rsph9
Radial spoke head 9 homolog.
   
 
 0.796
ENSONIP00000056453
annotation not available
   
   0.795
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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