STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691891Tetraspanin. (239 aa)    
Predicted Functional Partners:
CD9
Tetraspanin.
  
 
 
0.717
LOC100704944
CD9 antigen.
    
 
0.710
ptgfrn
Si:ch211-132g1.7.
    
 
 0.693
Ptgfrn
Prostaglandin F2 receptor negative regulator.
    
 
 0.693
LOC100709183
Uncharacterized protein.
    
 0.599
cd63
Tetraspanin.
    
 
0.591
LOC102081683
Complement receptor type 1 isoform X1.
    
 0.591
LOC100534520
Serine protease 59, tandem duplicate 1; Belongs to the peptidase S1 family.
     
 0.583
LOC100703394
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.569
igsf8
Immunoglobulin superfamily, member 8.
    
 
 0.544
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.