Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100694676Protogenin homolog b (Gallus gallus). (1143 aa)    
Predicted Functional Partners:
capsl
Calcyphosine-like b.
    
 
 0.758
atp8b2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
     
 0.752
rsl24d1
Ribosomal L24 domain containing 1.
 
    
 0.746
LOC100701936
Methyl-CpG binding domain protein 3b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.654
LOC100704305
Myosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.634
LOC100692989
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 
 0.590
il7r
Fibronectin type-III domain-containing protein.
     
 0.573
I3JMB1_ORENI
Angiomotin.
     
 0.538
kbtbd11
Kelch repeat and BTB (POZ) domain containing 11.
      
 0.522
cfap53
Uncharacterized protein.
    
 0.461
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.