Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Wbp11WW domain binding protein 11. (694 aa)    
Predicted Functional Partners:
pqbp1
Polyglutamine binding protein 1.
    
 0.999
ctnnbl1
Catenin, beta like 1.
    
 0.992
cwc15
CWC15 spliceosome associated protein homolog.
   
 0.990
plrg1
Pleiotropic regulator 1.
    
 0.988
bcas2
BCAS2 pre-mRNA processing factor.
   
 
 0.964
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.927
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.893
mfap1
Microfibril associated protein 1.
   
 0.887
I3KN33_ORENI
Zinc finger, matrin-type 2.
   
 0.882
I3KMX6_ORENI
IK cytokine.
   
  0.881
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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