STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgpMatrix Gla protein. (106 aa)    
Predicted Functional Partners:
ggcx
Gamma-glutamyl carboxylase.
    
 
 0.932
bglap
Gla domain-containing protein.
      
 0.688
ENSONIP00000066554
annotation not available
   
  
 0.673
gas6
Uncharacterized protein.
      
 0.640
LOC100706346
Vitamin K epoxide reductase complex, subunit 1.
      
 0.637
erp27
Uncharacterized protein.
      
 0.635
smpx
Small muscle protein X-linked.
      
 0.611
LOC100707163
Vinculin a.
      
 0.610
Vcl
Vinculin b.
      
 0.610
dcn
Decorin; May affect the rate of fibrils formation.
   
  
 0.607
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.