Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707066Interleukin-1. (244 aa)    
Predicted Functional Partners:
il1rap
Uncharacterized protein.
    
 0.998
LOC100702124
Interleukin 1 receptor type 2.
   
 0.997
LOC100534578
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.991
LOC100702660
Uncharacterized protein.
   
 0.990
LOC100702929
Zmp:0000000936.
   
 0.990
il10
Interleukin 10.
   
 
 0.986
LOC100693633
PYD and CARD domain containing.
   
 
 0.977
I3J9E1_ORENI
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
 0.976
I3KYD0_ORENI
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.965
LOC100707786
JunE proto-oncogene, AP-1 transcription factor subunit.
   
 0.965
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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