STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
henmt1HEN methyltransferase 1. (405 aa)    
Predicted Functional Partners:
I3JW57_ORENI
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
   
 
 0.679
pld6
Phospholipase D family, member 6.
      
 0.676
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.665
I3KW58_ORENI
Tudor domain containing 9.
     
 0.624
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
     
 0.623
tdrkh
Mbt domain containing 1.
     
 0.619
LOC100710203
Zgc:56699.
      
 0.596
fkbp6
Peptidylprolyl isomerase.
      
 0.585
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
    
 0.551
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
    
 0.551
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.