Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc134Si:dkey-167k11.5. (229 aa)    
Predicted Functional Partners:
LOC100708033
GTPase, IMAP family member 8.
    
 
 0.733
LOC100703489
GTPase, IMAP family member 8.
    
 
 0.733
MEI1
Meiotic double-stranded break formation protein 1.
 
    
 0.731
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.716
zbtb20
Zinc finger and BTB domain containing 20.
    
 0.707
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 
 0.707
tmed2
Transmembrane p24 trafficking protein 2.
    
 
 0.701
rpl9
Ribosomal protein L9.
    
  0.694
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.684
fkbp11
Peptidylprolyl isomerase.
   
 0.677
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.