Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706610Uncharacterized protein. (1097 aa)    
Predicted Functional Partners:
thap4
THAP domain containing 4.
      
 0.728
cfap20
Cilia and flagella associated protein 20.
    
 
 0.669
spata4
Spermatogenesis associated 4.
    
 
 0.661
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.659
Spag17
Uncharacterized protein.
    
 
 0.653
dlec1
DLEC1 cilia and flagella associated protein.
    
   0.647
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.647
ENSONIP00000016676
annotation not available
    
   0.647
mycbpap
Mycbp associated protein.
    
   0.647
Spata17
Uncharacterized protein.
   
   0.647
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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