Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698398Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
LOC100706477
XK-related protein.
    
 0.641
I3JJV2_ORENI
Neural cell adhesion molecule 3.
    
 0.520
xkr9
XK-related protein.
    
  0.493
LOC100695100
Calcium/calmodulin dependent protein kinase II beta.
   
 
 0.470
neo1
Neogenin 1b.
    
 0.464
Dcc
DCC netrin 1 receptor.
    
 0.464
LRRC17
Leucine rich repeat containing 17.
    
 0.447
LOC100710258
Leucine rich repeat containing 17.
    
 0.447
apbb1
Amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65).
    
 0.446
SLC6A13
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 
 0.444
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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