Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adalAdenosine deaminase-like. (353 aa)    
Predicted Functional Partners:
tm2d3
TM2 domain containing 3.
 
    
 0.758
cul1
Cullin 1b; Belongs to the cullin family.
   
 
 0.743
LOC100697759
Zgc:174895.
   
 0.739
aprt
Adenine phosphoribosyltransferase.
   
 0.739
ephx2
Epoxide hydrolase 2, cytoplasmic.
    
 0.731
LOC100693415
Adenosine kinase a.
   
 0.703
ADK
Adenosine kinase.
   
 0.703
polrmt
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
      
 0.700
phkb
Phosphorylase b kinase regulatory subunit beta isoform X2.
      
 0.683
edf1
Endothelial differentiation-related factor 1.
      
 0.682
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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