Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
caprin1Cell cycle associated protein 1b. (691 aa)    
Predicted Functional Partners:
G3bp1
GTPase activating protein (SH3 domain) binding protein 1.
   
 
 0.920
g3bp2
Zgc:56304.
   
 
 0.904
fmr1
Fragile X mental retardation 1.
   
 
 0.857
usp10
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.812
LOC100694078
Fragile X mental retardation, autosomal homolog 2.
   
 
 0.790
fxr1
Fragile X mental retardation, autosomal homolog 1.
   
 
 0.790
nufip2
Nuclear FMR1 interacting protein 2.
    
 
 0.781
nat10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
 
    
 0.680
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.658
dhx57
DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57.
   
 
 0.654
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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