STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HS6ST3Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (410 aa)    
Predicted Functional Partners:
LOC100696783
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
     
  0.916
LOC100691517
XK-related protein.
      
 0.736
glce
Glucuronic acid epimerase b.
    
 
 0.642
LOC100699683
Syndecan-2.
     
 0.575
gpc2
Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.513
LOC100710496
Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.513
LOC100696204
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.513
LOC102079339
Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.513
LOC100699730
Oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 2.
      
 0.489
LOC100692215
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1.
      
 0.476
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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