STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARP1FERM, ARH/RhoGEF and pleckstrin domain protein 1. (1039 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
     
 0.794
rap1b
Uncharacterized protein.
     
 0.638
LOC100690250
Ras-related protein Rap-1A.
     
 0.638
ENSONIP00000000682
Intersectin 2a.
     
 0.600
I3KKD0_ORENI
Intersectin 2b.
     
 0.600
nrp1
Neuropilin; Belongs to the neuropilin family.
     
 0.589
LOC100704372
Ras homolog family member F.
     
 0.557
LOC100692376
Ras-related protein Rap-1A.
     
 0.525
VAMP3
Vesicle associated membrane protein 3.
     
 0.507
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.479
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.