Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPEB4Cytoplasmic polyadenylation element binding protein 4. (777 aa)    
Predicted Functional Partners:
cpeb2
Cytoplasmic polyadenylation element binding protein 2.
   
  0.965
LOC100694808
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 0.932
cdk1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.926
Cntd2
Cyclin N-terminal domain containing 2; Belongs to the cyclin family.
   
 
 0.921
LOC100692470
Cyclin B2; Belongs to the cyclin family.
   
 
 0.921
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
   
 0.889
plk3
Serine/threonine-protein kinase PLK.
   
 0.850
plk2
Serine/threonine-protein kinase PLK.
   
 0.850
plk1
Serine/threonine-protein kinase PLK.
   
 0.850
LOC100706117
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 0.700
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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