Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705049C1q and TNF related 6a. (242 aa)    
Predicted Functional Partners:
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.746
shisa3
Shisa family member 3.
   
  
 0.683
Thsd7b
Thrombospondin, type I, domain containing 7Ba.
   
  
 0.648
angptl7
Angiopoietin-like 7.
      
 0.576
I3JSC5_ORENI
TELO2 interacting protein 1.
      
 0.575
dusp28
Dual specificity phosphatase 28.
   
  
 0.521
fndc1
Fibronectin type III domain containing 1.
   
  
 0.494
mycbpap
Mycbp associated protein.
      
 0.447
tekt4
Tektin 4.
   
  
 0.432
Col16a1
LAM_G_DOMAIN domain-containing protein.
    
 
 0.414
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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