STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710405MCF.2 cell line derived transforming sequence b. (1015 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
    
 0.746
LOC100694803
Ras homolog family member Cb.
    
 0.517
LOC100693083
Uncharacterized protein.
    
 0.517
I3K382_ORENI
Uncharacterized protein.
    
 0.517
LOC100710477
Ras homolog gene family, member Ab.
    
 0.517
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.517
LOC100707445
Uncharacterized protein.
    
 0.517
LOC100698785
Uncharacterized protein.
    
 0.517
LOC100705444
Uncharacterized protein.
    
 0.496
LOC100705703
Uncharacterized protein.
    
 0.496
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.