Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JPM5_ORENIActin binding LIM protein family member 3. (624 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
     
 0.847
ENSONIP00000006854
Actin binding LIM protein family, member 2.
     
  0.836
GNG5
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
      
 0.622
ENSONIP00000000694
annotation not available
     
  0.606
I3K3V9_ORENI
Dematin actin binding protein.
     
  0.606
I3JV92_ORENI
Actin binding LIM protein 1a.
     
  0.606
RAC2
Rac family small GTPase 2.
     
 0.605
LOC100696401
Ras-related C3 botulinum toxin substrate 1-like.
     
 0.605
RAC1
Rac family small GTPase 1.
     
 0.605
ENSONIP00000057298
Rac family small GTPase 3b.
     
 0.605
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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