Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100705141Upper zone of growth plate and cartilage matrix associated b. (134 aa)    
Predicted Functional Partners:
I3KXA9_ORENI
Fin bud initiation factor b.
      
 0.851
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.755
ccdc78
Coiled-coil domain containing 78.
      
 0.730
disc1
DISC1 scaffold protein.
      
 0.713
ush1c
USH1 protein network component harmonin.
      
 0.705
cpne8
Copine 8.
      
 0.629
ENSONIP00000067233
Copine VIII.
      
 0.629
ggcx
Gamma-glutamyl carboxylase.
      
 0.628
efcab2
EF-hand calcium binding domain 2.
      
 0.621
znf536
Zinc finger protein 536.
     
 0.621
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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