hoxd3 protein (Oreochromis niloticus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

hoxd3

Homeobox D3a. (399 aa)

Predicted Functional Partners:

Hoxd4

0.948

lnpk

0.484

hoxd9

0.474

LOC100711709

0.474

PDZRN4

0.444

pdzrn3

0.444

mtx2

0.440

hoxd10

0.439

LOC100690382

0.416

LOC100704063

0.406

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Hoxd4	LOC100711709	ENSONIP00000010827	ENSONIP00000057811	Homeobox D4a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.416
Hoxd4	hoxd3	ENSONIP00000010827	ENSONIP00000010825	Homeobox D4a.	Homeobox D3a.	0.948
Hoxd4	hoxd9	ENSONIP00000010827	ENSONIP00000041801	Homeobox D4a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.416
LOC100690382	LOC100711709	ENSONIP00000015414	ENSONIP00000057811	Homeobox C10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.529
LOC100690382	hoxd3	ENSONIP00000015414	ENSONIP00000010825	Homeobox C10a.	Homeobox D3a.	0.416
LOC100690382	hoxd9	ENSONIP00000015414	ENSONIP00000041801	Homeobox C10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.529
LOC100704063	hoxd3	ENSONIP00000010876	ENSONIP00000010825	Pre-B-cell leukemia homeobox 2.	Homeobox D3a.	0.406
LOC100711709	Hoxd4	ENSONIP00000057811	ENSONIP00000010827	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D4a.	0.416
LOC100711709	LOC100690382	ENSONIP00000057811	ENSONIP00000015414	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox C10a.	0.529
LOC100711709	hoxd10	ENSONIP00000057811	ENSONIP00000010829	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D10a.	0.661
LOC100711709	hoxd3	ENSONIP00000057811	ENSONIP00000010825	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D3a.	0.474
PDZRN4	hoxd3	ENSONIP00000010940	ENSONIP00000010825	PDZ domain containing ring finger 4.	Homeobox D3a.	0.444
hoxd10	LOC100711709	ENSONIP00000010829	ENSONIP00000057811	Homeobox D10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.661
hoxd10	hoxd3	ENSONIP00000010829	ENSONIP00000010825	Homeobox D10a.	Homeobox D3a.	0.439
hoxd10	hoxd9	ENSONIP00000010829	ENSONIP00000041801	Homeobox D10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.685
hoxd3	Hoxd4	ENSONIP00000010825	ENSONIP00000010827	Homeobox D3a.	Homeobox D4a.	0.948
hoxd3	LOC100690382	ENSONIP00000010825	ENSONIP00000015414	Homeobox D3a.	Homeobox C10a.	0.416
hoxd3	LOC100704063	ENSONIP00000010825	ENSONIP00000010876	Homeobox D3a.	Pre-B-cell leukemia homeobox 2.	0.406
hoxd3	LOC100711709	ENSONIP00000010825	ENSONIP00000057811	Homeobox D3a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.474
hoxd3	PDZRN4	ENSONIP00000010825	ENSONIP00000010940	Homeobox D3a.	PDZ domain containing ring finger 4.	0.444