NET1 protein (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

NET1

Uncharacterized protein. (583 aa)

Predicted Functional Partners:

ap2m1

0.620

magi1

0.608

I3KKZ0_ORENI

0.608

ap2s1

0.574

LOC100704432

0.543

wscd2

0.543

LOC100709793

0.543

LOC100698045

0.543

LOC100694803

0.514

LOC100693083

0.514

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3KKZ0_ORENI	NET1	ENSONIP00000063122	ENSONIP00000010854	Membrane associated guanylate kinase, WW and PDZ domain containing 1a.	Uncharacterized protein.	0.608
I3KKZ0_ORENI	magi1	ENSONIP00000063122	ENSONIP00000037480	Membrane associated guanylate kinase, WW and PDZ domain containing 1a.	Membrane associated guanylate kinase, WW and PDZ domain containing 1b.	0.916
LOC100693083	NET1	ENSONIP00000015456	ENSONIP00000010854	Uncharacterized protein.	Uncharacterized protein.	0.514
LOC100694803	NET1	ENSONIP00000002091	ENSONIP00000010854	Ras homolog family member Cb.	Uncharacterized protein.	0.514
LOC100698045	NET1	ENSONIP00000030852	ENSONIP00000010854	Somatostatin-1B.	Uncharacterized protein.	0.543
LOC100704432	NET1	ENSONIP00000005079	ENSONIP00000010854	Centromere protein S.	Uncharacterized protein.	0.543
LOC100709793	NET1	ENSONIP00000019964	ENSONIP00000010854	WSC domain containing 1b.	Uncharacterized protein.	0.543
NET1	I3KKZ0_ORENI	ENSONIP00000010854	ENSONIP00000063122	Uncharacterized protein.	Membrane associated guanylate kinase, WW and PDZ domain containing 1a.	0.608
NET1	LOC100693083	ENSONIP00000010854	ENSONIP00000015456	Uncharacterized protein.	Uncharacterized protein.	0.514
NET1	LOC100694803	ENSONIP00000010854	ENSONIP00000002091	Uncharacterized protein.	Ras homolog family member Cb.	0.514
NET1	LOC100698045	ENSONIP00000010854	ENSONIP00000030852	Uncharacterized protein.	Somatostatin-1B.	0.543
NET1	LOC100704432	ENSONIP00000010854	ENSONIP00000005079	Uncharacterized protein.	Centromere protein S.	0.543
NET1	LOC100709793	ENSONIP00000010854	ENSONIP00000019964	Uncharacterized protein.	WSC domain containing 1b.	0.543
NET1	ap2m1	ENSONIP00000010854	ENSONIP00000013073	Uncharacterized protein.	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	0.620
NET1	ap2s1	ENSONIP00000010854	ENSONIP00000070101	Uncharacterized protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.574
NET1	magi1	ENSONIP00000010854	ENSONIP00000037480	Uncharacterized protein.	Membrane associated guanylate kinase, WW and PDZ domain containing 1b.	0.608
NET1	wscd2	ENSONIP00000010854	ENSONIP00000016857	Uncharacterized protein.	WSC domain containing 2.	0.543
ap2m1	NET1	ENSONIP00000013073	ENSONIP00000010854	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	Uncharacterized protein.	0.620
ap2m1	ap2s1	ENSONIP00000013073	ENSONIP00000070101	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
ap2s1	NET1	ENSONIP00000070101	ENSONIP00000010854	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.574