Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100699838Chimerin 1. (338 aa)    
Predicted Functional Partners:
cav2
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
     
 0.579
nck1
Cytoplasmic protein.
    
 0.556
nck2
Cytoplasmic protein.
    
 0.556
hemk1
HemK methyltransferase family member 1.
    
   0.547
cdc42
Cell division cycle 42.
    
 0.538
RAC2
Rac family small GTPase 2.
    
 0.496
LOC100696401
Ras-related C3 botulinum toxin substrate 1-like.
    
 0.496
RAC1
Rac family small GTPase 1.
    
 0.496
ENSONIP00000057298
Rac family small GTPase 3b.
    
 0.496
slc31a2
Solute carrier family 31 member 2.
      
 0.490
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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