Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
I3JPR2_ORENISynaptic Ras GTPase activating protein 1b. (1437 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
     
 0.720
mras
Muscle RAS oncogene homolog.
    
 0.692
RASAL1
RAS protein activator like 1b (GAP1 like).
   
 0.692
LOC100704269
Si:ch211-1i11.3.
    
 0.685
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.685
LOC100699786
RAS related.
    
 0.618
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.610
I3JW29_ORENI
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.610
LOC100708442
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.610
rras2
RAS related 2.
    
 0.596
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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