STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JPR2_ORENISynaptic Ras GTPase activating protein 1b. (1437 aa)    
Predicted Functional Partners:
arhgap5
Rho GTPase activating protein 5.
    
 0.581
LOC100710886
Rho GTPase activating protein 35b.
    
 0.581
arhgap35
Uncharacterized protein.
    
 0.581
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
     
0.547
Nf1
Neurofibromin 1b.
    
0.535
dok1
Docking protein 1b.
    
 
 0.480
rasa3
RAS p21 protein activator 3.
    
0.478
RASA2
RAS p21 protein activator 2.
    
0.478
RASAL1
RAS protein activator like 1b (GAP1 like).
    
0.470
nek2
NIMA-related kinase 2.
    
 0.462
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.