Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JPS6_ORENIStanniocalcin 2b. (272 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.818
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.815
wdr5
WD repeat domain 5.
   
  0.765
LOC100705541
CXXC finger protein 1a.
   
 0.733
I3KWS1_ORENI
CXXC finger protein 1b.
   
 0.733
neu1
Neuraminidase 1.
  
 0.701
I3JPS1_ORENI
Biorientation of chromosomes in cell division 1.
 
      0.693
LOC100692647
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.665
setd1a
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.638
MSL3
MSL complex subunit 3.
    
 
 0.596
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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