Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tap1Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (734 aa)    
Predicted Functional Partners:
LOC100701247
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.980
tapbpl
TAP binding protein like.
   
 
 0.956
LOC100701980
Calreticulin.
   
 0.953
pdia3
Protein disulfide-isomerase.
   
 0.950
LOC100704618
Calreticulin.
   
 0.941
LOC100711757
Calreticulin.
   
 0.939
LOC100698679
Transporter associated with antigen processing, subunit type t, teleost specific.
  
  
0.930
I3JKW6_ORENI
Protein disulfide-isomerase.
   
  0.927
LOC100696572
Transporter associated with antigen processing, subunit type a.
     
  0.916
LOC100696839
Proteasome subunit beta.
   
 0.726
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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