Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704512Troponin I4b, tandem duplicate 1. (180 aa)    
Predicted Functional Partners:
TNNC1
Troponin C type 1a (slow).
   
 0.967
LOC100703845
Si:rp71-17i16.4.
   
 0.890
LOC100694953
Troponin T type 2a (cardiac).
   
 0.869
ENSONIP00000056018
Troponin T type 2b (cardiac).
   
 0.869
I3JH55_ORENI
Troponin T type 1 (skeletal, slow).
   
 0.862
LOC100705731
Uncharacterized protein.
   
 0.862
I3JPV4_ORENI
Uncharacterized protein.
   
 0.862
LOC100707421
Troponin T type 3a (skeletal, fast).
   
 0.862
I3KJ19_ORENI
Uncharacterized protein.
   
 0.862
I3KVX2_ORENI
Uncharacterized protein.
   
 0.862
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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