Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNM1LDynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (721 aa)    
Predicted Functional Partners:
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.949
gak
Cyclin G associated kinase.
   
 0.943
LOC100694194
Receptor-interacting serine-threonine kinase 3.
   
 0.924
LOC109194160
Protein kinase domain-containing protein.
   
 0.924
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.923
I3KJ10_ORENI
Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
  0.916
mff
Mitochondrial fission factor.
    
 0.888
LOC100697825
Mitochondrial elongation factor 2.
    
 
 0.879
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.816
ENSONIP00000000682
Intersectin 2a.
    
 
 0.812
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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