Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JPX1_ORENIShKT domain-containing protein; Belongs to the CRISP family. (281 aa)    
Predicted Functional Partners:
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.811
LOC100691569
Cytochrome b5 reductase 4.
     
 0.799
patj
PATJ crumbs cell polarity complex component.
      
 0.750
ece1
Endothelin converting enzyme 1.
   
  
 0.714
flii
FLII actin remodeling protein.
      
 0.655
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.582
Qpctl
Glutaminyl-peptide cyclotransferase-like a.
   
 
 0.556
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.545
LOC100707740
CAP-ZIP_m domain-containing protein.
      
 0.545
rbp4
Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.
      
 0.526
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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