STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nell2Neural EGFL like 2a. (813 aa)    
Predicted Functional Partners:
robo3
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
    
 0.912
SYNDIG1
Synapse differentiation inducing 1.
   
  
 0.598
NRXN2
Neurexin 2.
   
  
 0.584
jak1
Tyrosine-protein kinase.
   
 0.526
LOC100710173
Septin 8b; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
  
 0.507
Ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.478
ENSONIP00000038349
RING finger protein 223.
   
 0.436
I3JV04_ORENI
Translocase of outer mitochondrial membrane 20.
    
 0.433
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.433
gcn1
GCN1 activator of EIF2AK4.
   
 
 0.429
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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