STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JQH3_ORENILow density lipoprotein receptor-related protein 8, apolipoprotein e receptor. (949 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.855
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.815
faf1
Fas (TNFRSF6) associated factor 1.
      
 0.761
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.750
LOC100693720
DAB adaptor protein 1b.
    
 0.700
I3J3Q9_ORENI
DAB adaptor protein 1a.
    
 0.700
kank4
KN motif and ankyrin repeat domain-containing protein 4.
    
 0.655
ENSONIP00000000682
Intersectin 2a.
    
 0.645
I3KKD0_ORENI
Intersectin 2b.
    
 0.645
LOC100698110
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.627
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.