STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmrt2bDoublesex and mab-3 related transcription factor 2b. (443 aa)    
Predicted Functional Partners:
faf1
Fas (TNFRSF6) associated factor 1.
      
 0.779
LOC102077528
Uncharacterized protein.
      
 0.730
kptn
Kaptin (actin binding protein).
    
 0.718
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.714
depdc5
DEP domain containing 5.
   
 0.694
wdr59
WD repeat domain 59.
    
 0.683
wdr24
WD repeat domain 24.
    
 0.678
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.667
LOC100712136
Uncharacterized protein.
      
 0.640
I3JQH3_ORENI
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
      
 0.625
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.