STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695238Si:ch211-262h13.5. (407 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.759
LOC100697699
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.531
LOC100692890
RAN binding protein 2.
    
 0.521
LOC100702432
Uncharacterized protein.
   
  
 0.498
LOC100694811
Hemopexin a.
   
  
 0.490
itih2
Inter-alpha-trypsin inhibitor heavy chain 2.
   
  
 0.486
LOC100692670
Ras-related GTP binding D.
     
 0.473
agt
Angiotensinogen; Belongs to the serpin family.
      
 0.461
SPOCK2
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2.
      
 0.461
LOC100699682
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2.
      
 0.461
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.